STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS4ADAM metallopeptidase with thrombospondin type 1 motif 4. (885 aa)    
Predicted Functional Partners:
ACAN
Aggrecan.
     
 0.867
BCAN
Brevican.
     
 0.860
MMP13
Matrix metallopeptidase 13.
    
 
 0.762
MMP3
Matrix metallopeptidase 3.
    
 
 0.669
COL2A1
Collagen type II alpha 1 chain.
    
 0.616
Col10a1
C1q domain-containing protein.
    
 0.581
B3GLCT
Beta 3-glucosyltransferase.
    
 0.571
POFUT2
Protein O-fucosyltransferase 2.
     
 0.535
COL1A1
Collagen type I alpha 1 chain.
    
 0.530
COL1A2
Collagen type I alpha 2 chain.
    
 0.527
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.