STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA6Integrin subunit alpha 6; Belongs to the integrin alpha chain family. (1158 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.999
LAMC1
Laminin subunit gamma 1.
    
 0.989
LAMA5
Laminin subunit alpha 5.
    
 0.987
ITGB4
Integrin beta.
   
 0.979
LAMC3
Laminin subunit gamma 3.
    
 0.963
LAMA2
Laminin subunit alpha 2.
    
 0.956
LAMA3
Laminin subunit alpha 3.
    
 0.949
LAMB3
Laminin subunit beta 3.
   
 0.946
LAMA1
Laminin subunit alpha 1.
    
 0.938
LAMB2
Laminin subunit beta 2.
    
 0.936
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.