STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYND8Zinc finger MYND-type containing 8. (1213 aa)    
Predicted Functional Partners:
INTS6
Integrator complex subunit 6.
    
   0.986
INTS1
Integrator complex subunit 1.
    
   0.986
INTS5
Integrator complex subunit 5.
    
   0.986
INTS3
Integrator complex subunit 3.
    
   0.986
DBN1
Drebrin 1.
    
   0.940
ZNF687
Zinc finger protein 687.
    
 
 0.838
ZNF592
Zinc finger protein 592.
    
 
 0.799
Chd4
Uncharacterized protein.
    
 
0.759
DBNL
Drebrin like.
    
   0.748
GATAD2A
GATA zinc finger domain containing 2A.
   
 
 0.701
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.