STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETDB2SET domain bifurcated histone lysine methyltransferase 2. (667 aa)    
Predicted Functional Partners:
PHF11
PHD finger protein 11.
 
   
 0.961
ATF7IP
Activating transcription factor 7 interacting protein.
   
 0.935
H0V482_CAVPO
Uncharacterized protein.
   
 0.920
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.916
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.863
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.813
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
0.809
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
  0.804
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
  0.804
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
  0.804
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.