STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPOP00000027301Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.675
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.675
TRIM23
Tripartite motif containing 23.
   
 0.588
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.532
IQSEC2
IQ motif and Sec7 domain 2.
    
 0.474
IQSEC3
IQ motif and Sec7 domain 3.
    
 0.474
IQSEC1
IQ motif and Sec7 domain 1.
    
 0.474
Arl9
Uncharacterized protein.
    
 0.467
ARL4D
ADP ribosylation factor like GTPase 4D; Belongs to the small GTPase superfamily. Arf family.
    
 0.467
SPAM1
Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid.
    
 0.467
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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