NAPG protein (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAPG

NSF attachment protein gamma. (311 aa)

Predicted Functional Partners:

NAPA

0.965

NAPB

0.927

H0W6Z4_CAVPO

0.926

Nsf

0.926

STX6

0.915

VTI1A

0.913

STX16

0.897

GOSR1

0.886

STX12

0.880

STX7

0.880

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GOSR1	H0W6Z4_CAVPO	ENSCPOP00000022602	ENSCPOP00000018748	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.796
GOSR1	NAPA	ENSCPOP00000022602	ENSCPOP00000009533	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	NSF attachment protein alpha.	0.915
GOSR1	NAPB	ENSCPOP00000022602	ENSCPOP00000030141	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	NSF attachment protein beta.	0.915
GOSR1	NAPG	ENSCPOP00000022602	ENSCPOP00000027345	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	NSF attachment protein gamma.	0.886
GOSR1	Nsf	ENSCPOP00000022602	ENSCPOP00000026687	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.796
GOSR1	STX12	ENSCPOP00000022602	ENSCPOP00000011847	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Syntaxin 12; Belongs to the syntaxin family.	0.936
GOSR1	STX16	ENSCPOP00000022602	ENSCPOP00000019754	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Syntaxin 16; Belongs to the syntaxin family.	0.679
GOSR1	STX6	ENSCPOP00000022602	ENSCPOP00000026809	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Syntaxin 6; Belongs to the syntaxin family.	0.942
GOSR1	STX7	ENSCPOP00000022602	ENSCPOP00000027591	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Syntaxin 7; Belongs to the syntaxin family.	0.936
GOSR1	VTI1A	ENSCPOP00000022602	ENSCPOP00000005560	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Vesicle transport through interaction with t-SNAREs 1A.	0.732
H0W6Z4_CAVPO	GOSR1	ENSCPOP00000018748	ENSCPOP00000022602	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.796
H0W6Z4_CAVPO	NAPA	ENSCPOP00000018748	ENSCPOP00000009533	Uncharacterized protein.	NSF attachment protein alpha.	0.966
H0W6Z4_CAVPO	NAPB	ENSCPOP00000018748	ENSCPOP00000030141	Uncharacterized protein.	NSF attachment protein beta.	0.955
H0W6Z4_CAVPO	NAPG	ENSCPOP00000018748	ENSCPOP00000027345	Uncharacterized protein.	NSF attachment protein gamma.	0.926
H0W6Z4_CAVPO	STX12	ENSCPOP00000018748	ENSCPOP00000011847	Uncharacterized protein.	Syntaxin 12; Belongs to the syntaxin family.	0.865
H0W6Z4_CAVPO	STX16	ENSCPOP00000018748	ENSCPOP00000019754	Uncharacterized protein.	Syntaxin 16; Belongs to the syntaxin family.	0.819
H0W6Z4_CAVPO	STX6	ENSCPOP00000018748	ENSCPOP00000026809	Uncharacterized protein.	Syntaxin 6; Belongs to the syntaxin family.	0.873
H0W6Z4_CAVPO	STX7	ENSCPOP00000018748	ENSCPOP00000027591	Uncharacterized protein.	Syntaxin 7; Belongs to the syntaxin family.	0.865
H0W6Z4_CAVPO	VTI1A	ENSCPOP00000018748	ENSCPOP00000005560	Uncharacterized protein.	Vesicle transport through interaction with t-SNAREs 1A.	0.858
NAPA	GOSR1	ENSCPOP00000009533	ENSCPOP00000022602	NSF attachment protein alpha.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.915