RBM18 protein (Cavia porcellus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Coexpression

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[Homology]

Score

RBM18

RNA binding motif protein 18. (190 aa)

Predicted Functional Partners:

TMOD2

0.660

LDB1

0.613

LDB2

0.613

SRF

0.574

GSN

0.540

TMOD3

0.539

TCF4

0.495

TCF12

0.495

TCF3

0.495

MKRN2

0.483

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GSN	RBM18	ENSCPOP00000007540	ENSCPOP00000027871	Gelsolin.	RNA binding motif protein 18.	0.540
GSN	TMOD2	ENSCPOP00000007540	ENSCPOP00000011337	Gelsolin.	Tropomodulin 2.	0.750
GSN	TMOD3	ENSCPOP00000007540	ENSCPOP00000002572	Gelsolin.	Tropomodulin 3.	0.667
LDB1	RBM18	ENSCPOP00000009260	ENSCPOP00000027871	LIM domain binding 1.	RNA binding motif protein 18.	0.613
LDB1	TCF12	ENSCPOP00000009260	ENSCPOP00000008217	LIM domain binding 1.	Transcription factor 12.	0.816
LDB1	TCF3	ENSCPOP00000009260	ENSCPOP00000029307	LIM domain binding 1.	Transcription factor 3.	0.885
LDB1	TCF4	ENSCPOP00000009260	ENSCPOP00000004736	LIM domain binding 1.	Transcription factor 4.	0.877
LDB2	RBM18	ENSCPOP00000022415	ENSCPOP00000027871	LIM domain binding 2.	RNA binding motif protein 18.	0.613
LDB2	TCF12	ENSCPOP00000022415	ENSCPOP00000008217	LIM domain binding 2.	Transcription factor 12.	0.754
LDB2	TCF3	ENSCPOP00000022415	ENSCPOP00000029307	LIM domain binding 2.	Transcription factor 3.	0.881
LDB2	TCF4	ENSCPOP00000022415	ENSCPOP00000004736	LIM domain binding 2.	Transcription factor 4.	0.754
MKRN2	RBM18	ENSCPOP00000001091	ENSCPOP00000027871	Makorin ring finger protein 2.	RNA binding motif protein 18.	0.483
RBM18	GSN	ENSCPOP00000027871	ENSCPOP00000007540	RNA binding motif protein 18.	Gelsolin.	0.540
RBM18	LDB1	ENSCPOP00000027871	ENSCPOP00000009260	RNA binding motif protein 18.	LIM domain binding 1.	0.613
RBM18	LDB2	ENSCPOP00000027871	ENSCPOP00000022415	RNA binding motif protein 18.	LIM domain binding 2.	0.613
RBM18	MKRN2	ENSCPOP00000027871	ENSCPOP00000001091	RNA binding motif protein 18.	Makorin ring finger protein 2.	0.483
RBM18	SRF	ENSCPOP00000027871	ENSCPOP00000015471	RNA binding motif protein 18.	Serum response factor.	0.574
RBM18	TCF12	ENSCPOP00000027871	ENSCPOP00000008217	RNA binding motif protein 18.	Transcription factor 12.	0.495
RBM18	TCF3	ENSCPOP00000027871	ENSCPOP00000029307	RNA binding motif protein 18.	Transcription factor 3.	0.495
RBM18	TCF4	ENSCPOP00000027871	ENSCPOP00000004736	RNA binding motif protein 18.	Transcription factor 4.	0.495