STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN1Spectrin beta chain; Belongs to the spectrin family. (2364 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
0.966
Ank3
Uncharacterized protein.
   
 0.962
SPTA1
Spectrin alpha, erythrocytic 1.
   
0.934
ANK2
Ankyrin 2.
   
 0.894
ANK1
Ankyrin 1.
   
 0.825
Ankrd60
ANK_REP_REGION domain-containing protein.
   
 0.775
IQANK1
IQ motif and ankyrin repeat containing 1.
   
 0.775
EPB41L3
Erythrocyte membrane protein band 4.1 like 3.
   
 0.758
ITSN2
Intersectin 2.
     
 0.728
ANKDD1B
Ankyrin repeat and death domain containing 1B.
   
 0.722
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.