STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT80Keratin 80; Belongs to the intermediate filament family. (455 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
      
 0.664
VSTM2L
V-set and transmembrane domain containing 2 like.
      
 0.614
KRT7
Keratin 7; Belongs to the intermediate filament family.
  
 
0.582
H0VIH7_CAVPO
Uncharacterized protein.
      
 0.566
KRT84
Keratin 84; Belongs to the intermediate filament family.
  
 
 
0.516
KRT4
Keratin 4; Belongs to the intermediate filament family.
    
 
0.514
GPR52
G protein-coupled receptor 52; Belongs to the G-protein coupled receptor 1 family.
      
 0.510
KRT82
Keratin 82; Belongs to the intermediate filament family.
    
 
0.505
GLRA3
Glycine receptor alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.497
KRT19
Keratin 19; Belongs to the intermediate filament family.
   
 
0.496
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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