STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA6BSemaphorin 6B; Belongs to the semaphorin family. (990 aa)    
Predicted Functional Partners:
PLXNA2
Plexin A2.
    
 0.859
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.850
PLXNA4
Plexin A4.
    
0.816
SEMA6C
Semaphorin 6C; Belongs to the semaphorin family.
     
0.803
SEMA6D
Semaphorin 6D; Belongs to the semaphorin family.
     
0.798
PLXNA3
Plexin A3.
    
 0.798
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
     
0.794
MST1R
Macrophage stimulating 1 receptor.
    
 0.779
PLXNA1
Plexin A1.
    
 0.778
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.768
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.