Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CISD2 | LOC100720044 | ENSCPOP00000030802 | ENSCPOP00000020100 | CDGSH iron sulfur domain 2. | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.851 |
CISD2 | PAX3 | ENSCPOP00000030802 | ENSCPOP00000005658 | CDGSH iron sulfur domain 2. | Paired box 3. | 0.792 |
CISD2 | PAX4 | ENSCPOP00000030802 | ENSCPOP00000005632 | CDGSH iron sulfur domain 2. | Paired box 4. | 0.792 |
CISD2 | PAX6 | ENSCPOP00000030802 | ENSCPOP00000006528 | CDGSH iron sulfur domain 2. | Paired box 6. | 0.792 |
CISD2 | SLU7 | ENSCPOP00000030802 | ENSCPOP00000004044 | CDGSH iron sulfur domain 2. | SLU7 homolog, splicing factor. | 0.820 |
CISD2 | Sdhd | ENSCPOP00000030802 | ENSCPOP00000002878 | CDGSH iron sulfur domain 2. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family. | 0.870 |
CISD2 | TIMM10 | ENSCPOP00000030802 | ENSCPOP00000022763 | CDGSH iron sulfur domain 2. | Translocase of inner mitochondrial membrane 10. | 0.966 |
CISD2 | TIMM9 | ENSCPOP00000030802 | ENSCPOP00000029729 | CDGSH iron sulfur domain 2. | Translocase of inner mitochondrial membrane 9. | 0.877 |
CISD2 | TRDC | ENSCPOP00000030802 | ENSCPOP00000000758 | CDGSH iron sulfur domain 2. | T cell receptor delta constant. | 0.877 |
CISD2 | Timm10b | ENSCPOP00000030802 | ENSCPOP00000022999 | CDGSH iron sulfur domain 2. | zf-Tim10_DDP domain-containing protein. | 0.877 |
LOC100720044 | CISD2 | ENSCPOP00000020100 | ENSCPOP00000030802 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | CDGSH iron sulfur domain 2. | 0.851 |
LOC100720044 | PAX3 | ENSCPOP00000020100 | ENSCPOP00000005658 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Paired box 3. | 0.557 |
LOC100720044 | PAX4 | ENSCPOP00000020100 | ENSCPOP00000005632 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Paired box 4. | 0.557 |
LOC100720044 | PAX6 | ENSCPOP00000020100 | ENSCPOP00000006528 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Paired box 6. | 0.557 |
LOC100720044 | Sdhd | ENSCPOP00000020100 | ENSCPOP00000002878 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family. | 0.617 |
LOC100720044 | TIMM10 | ENSCPOP00000020100 | ENSCPOP00000022763 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Translocase of inner mitochondrial membrane 10. | 0.920 |
LOC100720044 | TIMM9 | ENSCPOP00000020100 | ENSCPOP00000029729 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Translocase of inner mitochondrial membrane 9. | 0.928 |
LOC100720044 | TRDC | ENSCPOP00000020100 | ENSCPOP00000000758 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | T cell receptor delta constant. | 0.840 |
LOC100720044 | Timm10b | ENSCPOP00000020100 | ENSCPOP00000022999 | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | zf-Tim10_DDP domain-containing protein. | 0.850 |
PAX3 | CISD2 | ENSCPOP00000005658 | ENSCPOP00000030802 | Paired box 3. | CDGSH iron sulfur domain 2. | 0.792 |
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