STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cd48Ig-like domain-containing protein. (240 aa)    
Predicted Functional Partners:
Cd244
Ig-like domain-containing protein.
   
 0.991
CD53
Tetraspanin.
   
  
 0.800
CD2
CD2 molecule.
   
 0.774
CD84
CD84 molecule.
 
 
 
 0.773
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.758
FANCM
FA complementation group M.
    
 0.756
H0V8X3_CAVPO
Ig-like domain-containing protein.
   
 
 0.755
POLD1
DNA polymerase.
   
 0.754
SH2D1A
SH2 domain containing 1A.
   
 0.732
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.717
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.