Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FYN | NRP1 | ENSCPOP00000025358 | ENSCPOP00000008102 | Tyrosine-protein kinase. | Neuropilin; Belongs to the neuropilin family. | 0.647 |
FYN | PLXNA1 | ENSCPOP00000025358 | ENSCPOP00000013337 | Tyrosine-protein kinase. | Plexin A1. | 0.922 |
FYN | PLXNA2 | ENSCPOP00000025358 | ENSCPOP00000031088 | Tyrosine-protein kinase. | Plexin A2. | 0.922 |
FYN | PLXNA4 | ENSCPOP00000025358 | ENSCPOP00000012197 | Tyrosine-protein kinase. | Plexin A4. | 0.922 |
FYN | RAC1 | ENSCPOP00000025358 | ENSCPOP00000022339 | Tyrosine-protein kinase. | Ras-related C3 botulinum toxin substrate 1. | 0.856 |
FYN | RAC2 | ENSCPOP00000025358 | ENSCPOP00000014775 | Tyrosine-protein kinase. | Ras-related C3 botulinum toxin substrate 2; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses, such as secretory processes, phagocytose of apoptotic cells and epithelial cell polarization. Augments the production of reactive oxygen species (ROS) by NADPH oxidase (By similarity). | 0.938 |
FYN | RND1 | ENSCPOP00000025358 | ENSCPOP00000021791 | Tyrosine-protein kinase. | Rho family GTPase 1. | 0.567 |
FYN | SEMA3A | ENSCPOP00000025358 | ENSCPOP00000003154 | Tyrosine-protein kinase. | Semaphorin 3A; Belongs to the semaphorin family. | 0.485 |
NRP1 | FYN | ENSCPOP00000008102 | ENSCPOP00000025358 | Neuropilin; Belongs to the neuropilin family. | Tyrosine-protein kinase. | 0.647 |
NRP1 | PLXNA1 | ENSCPOP00000008102 | ENSCPOP00000013337 | Neuropilin; Belongs to the neuropilin family. | Plexin A1. | 0.990 |
NRP1 | PLXNA2 | ENSCPOP00000008102 | ENSCPOP00000031088 | Neuropilin; Belongs to the neuropilin family. | Plexin A2. | 0.998 |
NRP1 | PLXNA4 | ENSCPOP00000008102 | ENSCPOP00000012197 | Neuropilin; Belongs to the neuropilin family. | Plexin A4. | 0.996 |
NRP1 | RAC1 | ENSCPOP00000008102 | ENSCPOP00000022339 | Neuropilin; Belongs to the neuropilin family. | Ras-related C3 botulinum toxin substrate 1. | 0.561 |
NRP1 | RAC2 | ENSCPOP00000008102 | ENSCPOP00000014775 | Neuropilin; Belongs to the neuropilin family. | Ras-related C3 botulinum toxin substrate 2; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses, such as secretory processes, phagocytose of apoptotic cells and epithelial cell polarization. Augments the production of reactive oxygen species (ROS) by NADPH oxidase (By similarity). | 0.519 |
NRP1 | SEMA3A | ENSCPOP00000008102 | ENSCPOP00000003154 | Neuropilin; Belongs to the neuropilin family. | Semaphorin 3A; Belongs to the semaphorin family. | 0.999 |
NRP1 | SEMA6A | ENSCPOP00000008102 | ENSCPOP00000028858 | Neuropilin; Belongs to the neuropilin family. | Semaphorin 6A; Belongs to the semaphorin family. | 0.868 |
PLXNA1 | FYN | ENSCPOP00000013337 | ENSCPOP00000025358 | Plexin A1. | Tyrosine-protein kinase. | 0.922 |
PLXNA1 | NRP1 | ENSCPOP00000013337 | ENSCPOP00000008102 | Plexin A1. | Neuropilin; Belongs to the neuropilin family. | 0.990 |
PLXNA1 | PLXNA2 | ENSCPOP00000013337 | ENSCPOP00000031088 | Plexin A1. | Plexin A2. | 0.916 |
PLXNA1 | PLXNA4 | ENSCPOP00000013337 | ENSCPOP00000012197 | Plexin A1. | Plexin A4. | 0.958 |
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