STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CiartUncharacterized protein. (121 aa)    
Predicted Functional Partners:
H0VZ93_CAVPO
PAS domain-containing protein.
   
 
 0.638
PER2
Period circadian regulator 2.
   
 
 0.638
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 
 0.572
CRY2
Cryptochrome circadian regulator 2.
    
 
 0.568
TEF
TEF transcription factor, PAR bZIP family member.
   
  
 0.568
USP2
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
  
 0.564
CRY1
Cryptochrome circadian regulator 1.
    
 
 0.510
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 
 0.492
PER1
Period circadian regulator 1.
   
 
 0.465
WEE1
Wee1-like protein kinase.
      
 0.454
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.