STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ube2fUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (185 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.986
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.985
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.981
Ubxn7
UBX domain-containing protein 7.
   
 
 0.977
RBX1
Ring-box 1.
    
 0.977
NAE1
NEDD8 activating enzyme E1 subunit 1.
    
 0.972
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.963
Dcun1d3
DCN1-like protein.
    
 0.950
ENSCPOP00000029395
DCN1-like protein.
    
 0.950
RNF7
Ring finger protein 7.
    
 0.926
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.