STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1CGRAM domain containing 1C. (458 aa)    
Predicted Functional Partners:
Jaml
Uncharacterized protein.
    
 0.673
SCN2B
Sodium voltage-gated channel beta subunit 2.
    
 0.673
CD151
Tetraspanin.
    
   0.660
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.620
GRAMD2B
GRAM domain containing 2B.
    
 
 0.590
GTPBP8
GTP binding protein 8 (putative).
      
 0.566
GRAMD1B
GRAM domain containing 1B.
    
  
0.541
TSPAN11
Tetraspanin.
    
   0.539
Spice1
Uncharacterized protein.
      
 0.526
UBE2Q2
Ubiquitin conjugating enzyme E2 Q2.
   
    0.461
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.