STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT7Synaptotagmin 7. (556 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.788
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.779
STX4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.763
Vamp2
V-SNARE coiled-coil homology domain-containing protein.
    
 0.759
RAB3A
RAB3A, member RAS oncogene family.
   
 0.734
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
     
 0.716
ITSN2
Intersectin 2.
     
 0.705
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
    
 0.693
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.679
RAB3D
RAB3D, member RAS oncogene family.
   
 0.673
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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