Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLYR1 | H2BC3 | ENSCPOP00000010428 | ENSCPOP00000032885 | Glyoxylate reductase 1 homolog. | Histone H2B; Belongs to the histone H2B family. | 0.802 |
GLYR1 | KDM6A | ENSCPOP00000010428 | ENSCPOP00000013041 | Glyoxylate reductase 1 homolog. | Lysine demethylase 6A. | 0.594 |
GLYR1 | KDM6B | ENSCPOP00000010428 | ENSCPOP00000003983 | Glyoxylate reductase 1 homolog. | Lysine demethylase 6B. | 0.594 |
GLYR1 | MACROH2A1 | ENSCPOP00000010428 | ENSCPOP00000000398 | Glyoxylate reductase 1 homolog. | Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. | 0.878 |
H0VS04_CAVPO | H2BC3 | ENSCPOP00000013386 | ENSCPOP00000032885 | Hist_deacetyl domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.806 |
H0VS04_CAVPO | HDAC2 | ENSCPOP00000013386 | ENSCPOP00000012920 | Hist_deacetyl domain-containing protein. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.682 |
H0VS04_CAVPO | Hdac8 | ENSCPOP00000013386 | ENSCPOP00000005113 | Hist_deacetyl domain-containing protein. | Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.732 |
H0VS04_CAVPO | KDM6A | ENSCPOP00000013386 | ENSCPOP00000013041 | Hist_deacetyl domain-containing protein. | Lysine demethylase 6A. | 0.561 |
H0VS04_CAVPO | KDM6B | ENSCPOP00000013386 | ENSCPOP00000003983 | Hist_deacetyl domain-containing protein. | Lysine demethylase 6B. | 0.561 |
H0VS04_CAVPO | LEO1 | ENSCPOP00000013386 | ENSCPOP00000008679 | Hist_deacetyl domain-containing protein. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.689 |
H0VS04_CAVPO | MACROH2A1 | ENSCPOP00000013386 | ENSCPOP00000000398 | Hist_deacetyl domain-containing protein. | Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. | 0.862 |
H2BC3 | GLYR1 | ENSCPOP00000032885 | ENSCPOP00000010428 | Histone H2B; Belongs to the histone H2B family. | Glyoxylate reductase 1 homolog. | 0.802 |
H2BC3 | H0VS04_CAVPO | ENSCPOP00000032885 | ENSCPOP00000013386 | Histone H2B; Belongs to the histone H2B family. | Hist_deacetyl domain-containing protein. | 0.806 |
H2BC3 | HDAC2 | ENSCPOP00000032885 | ENSCPOP00000012920 | Histone H2B; Belongs to the histone H2B family. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.816 |
H2BC3 | HDAC4 | ENSCPOP00000032885 | ENSCPOP00000011770 | Histone H2B; Belongs to the histone H2B family. | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | 0.802 |
H2BC3 | HDAC6 | ENSCPOP00000032885 | ENSCPOP00000025814 | Histone H2B; Belongs to the histone H2B family. | Histone deacetylase 6. | 0.802 |
H2BC3 | Hdac8 | ENSCPOP00000032885 | ENSCPOP00000005113 | Histone H2B; Belongs to the histone H2B family. | Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.842 |
H2BC3 | KDM6A | ENSCPOP00000032885 | ENSCPOP00000013041 | Histone H2B; Belongs to the histone H2B family. | Lysine demethylase 6A. | 0.830 |
H2BC3 | KDM6B | ENSCPOP00000032885 | ENSCPOP00000003983 | Histone H2B; Belongs to the histone H2B family. | Lysine demethylase 6B. | 0.830 |
H2BC3 | LEO1 | ENSCPOP00000032885 | ENSCPOP00000008679 | Histone H2B; Belongs to the histone H2B family. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.859 |
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