STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK2SLIT and NTRK like family member 2. (845 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
   
 0.992
PTPRS
Protein tyrosine phosphatase receptor type S.
   
 0.992
PTPRF
Protein tyrosine phosphatase receptor type F.
   
 0.970
PTPRA
Protein tyrosine phosphatase receptor type A.
   
 0.917
PTPRE
Protein tyrosine phosphatase receptor type E.
   
 0.917
SLITRK4
SLIT and NTRK like family member 4.
   
 
  0.910
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.904
SLITRK6
SLIT and NTRK like family member 6.
   
 
  0.876
SLITRK1
SLIT and NTRK like family member 1.
   
 
  0.873
ENSODEP00000025351
annotation not available
    
 0.841
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.