STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000000057annotation not available (123 aa)    
Predicted Functional Partners:
ENSODEP00000000099
annotation not available
   
 0.982
ENSODEP00000018854
annotation not available
   
 0.966
ENSODEP00000021380
annotation not available
   
 0.966
Fau
annotation not available
   
 0.966
RPL15
Ribosomal protein L15.
   
 0.962
ENSODEP00000009292
annotation not available
   
 0.962
ENSODEP00000017505
annotation not available
   
 0.962
RPL3L
Ribosomal protein L3 like.
   
 0.956
ENSODEP00000007747
annotation not available
   
 0.954
RPL27
Ribosomal protein L27.
   
 0.954
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.