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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB22ARAB22A, member RAS oncogene family. (194 aa)    
Predicted Functional Partners:
ENSODEP00000020619
annotation not available
   
 0.991
RAB31
RAB31, member RAS oncogene family.
  
 
 
0.983
RBSN
Rabenosyn, RAB effector.
   
 0.983
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.960
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.949
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.949
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.934
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 0.930
ANKRD27
Ankyrin repeat domain 27.
    
 0.914
ENSODEP00000003271
annotation not available
    
 0.898
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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