STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCC3Activating signal cointegrator 1 complex subunit 3. (2203 aa)    
Predicted Functional Partners:
TRIP4
Thyroid hormone receptor interactor 4.
   
 0.999
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.999
ASCC1
Activating signal cointegrator 1 complex subunit 1.
    
 0.993
PRPF8
pre-mRNA processing factor 8.
   
 0.972
ZNF598
Zinc finger protein 598.
    
 0.972
PRPF6
pre-mRNA processing factor 6.
   
 0.932
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 0.930
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.921
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.907
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.902
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.