STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000000079annotation not available (637 aa)    
Predicted Functional Partners:
SLC1A7
Solute carrier family 1 member 7.
    
 0.930
SLC1A6
Solute carrier family 1 member 6.
  
 
 0.917
SLC1A3
Solute carrier family 1 member 3.
  
 
 0.914
SFT2D2
SFT2 domain containing 2.
    
   0.841
SLC6A4
Solute carrier family 6 member 4.
   
 
 0.816
SLC1A5
Solute carrier family 1 member 5.
    
 0.793
SLC6A1
Solute carrier family 6 member 1.
   
 
  0.789
SLC6A7
Solute carrier family 6 member 7.
     
  0.785
SLC6A3
Solute carrier family 6 member 3.
   
 
  0.785
SFT2D1
SFT2 domain containing 1.
    
   0.731
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.