STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000000224annotation not available (488 aa)    
Predicted Functional Partners:
DDX1
DEAD-box helicase 1.
   
 0.983
ENSODEP00000003998
annotation not available
    
 0.968
Rtraf
annotation not available
    
 0.968
SLFNL1
Schlafen like 1.
   
 0.958
C2orf49
Chromosome 2 open reading frame 49.
     
 0.891
ENSODEP00000017673
annotation not available
    
 0.889
ENSODEP00000006741
annotation not available
    
 0.847
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.815
ENSODEP00000012987
annotation not available
  
 
 
0.811
Fam98b
Family with sequence similarity 98 member B.
    
 
0.809
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.