STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTP1Receptor transporter protein 1. (227 aa)    
Predicted Functional Partners:
ISG15
ISG15 ubiquitin like modifier.
   
  
 0.863
ENSODEP00000004316
annotation not available
   
  
 0.856
CXCL10
C-X-C motif chemokine ligand 10.
   
  
 0.782
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.748
REEP1
Receptor accessory protein 1.
    
 0.669
IRF7
Interferon regulatory factor 7.
   
  
 0.645
IRF3
Interferon regulatory factor 3.
   
  
 0.621
IFI35
Interferon induced protein 35.
   
  
 0.581
CXCL9
C-X-C motif chemokine ligand 9.
   
  
 0.556
CXCL11
C-X-C motif chemokine ligand 11.
   
    0.554
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.