STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC3Coiled-coil domain containing 3. (185 aa)    
Predicted Functional Partners:
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
      
 0.536
PGLYRP2
Peptidoglycan recognition protein 2.
      
 0.477
NUDT5
Nudix hydrolase 5.
      
 0.465
CCDC65
Coiled-coil domain containing 65.
      
 0.456
PROSER2
Proline and serine rich 2.
      
 0.453
SERTAD4
SERTA domain containing 4.
      
 0.447
KIRREL3
Kirre like nephrin family adhesion molecule 3.
      
 0.410
CAMK1D
Calcium/calmodulin dependent protein kinase ID.
      
 0.408
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.408
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.