ENSODEP00000000618 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSODEP00000000618

annotation not available (381 aa)

Predicted Functional Partners:

MAT1A

0.988

MTHFR

0.983

ENSODEP00000002598

0.973

ENSODEP00000003492

0.973

ENSODEP00000003615

0.973

ENSODEP00000006516

0.973

ENSODEP00000017498

0.973

ENSODEP00000025199

0.973

ENSODEP00000026943

0.973

TAT

0.940

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000000618	ENSODEP00000002598	ENSODEP00000000618	ENSODEP00000002598	annotation not available	annotation not available	0.973
ENSODEP00000000618	ENSODEP00000003492	ENSODEP00000000618	ENSODEP00000003492	annotation not available	annotation not available	0.973
ENSODEP00000000618	ENSODEP00000003615	ENSODEP00000000618	ENSODEP00000003615	annotation not available	annotation not available	0.973
ENSODEP00000000618	ENSODEP00000006516	ENSODEP00000000618	ENSODEP00000006516	annotation not available	annotation not available	0.973
ENSODEP00000000618	ENSODEP00000017498	ENSODEP00000000618	ENSODEP00000017498	annotation not available	annotation not available	0.973
ENSODEP00000000618	ENSODEP00000025199	ENSODEP00000000618	ENSODEP00000025199	annotation not available	annotation not available	0.973
ENSODEP00000000618	ENSODEP00000026943	ENSODEP00000000618	ENSODEP00000026943	annotation not available	annotation not available	0.973
ENSODEP00000000618	MAT1A	ENSODEP00000000618	ENSODEP00000015202	annotation not available	Methionine adenosyltransferase 1A.	0.988
ENSODEP00000000618	MTHFR	ENSODEP00000000618	ENSODEP00000018192	annotation not available	Methylenetetrahydrofolate reductase.	0.983
ENSODEP00000000618	TAT	ENSODEP00000000618	ENSODEP00000019142	annotation not available	Tyrosine aminotransferase.	0.940
ENSODEP00000002598	ENSODEP00000000618	ENSODEP00000002598	ENSODEP00000000618	annotation not available	annotation not available	0.973
ENSODEP00000002598	MAT1A	ENSODEP00000002598	ENSODEP00000015202	annotation not available	Methionine adenosyltransferase 1A.	0.975
ENSODEP00000002598	MTHFR	ENSODEP00000002598	ENSODEP00000018192	annotation not available	Methylenetetrahydrofolate reductase.	0.417
ENSODEP00000002598	TAT	ENSODEP00000002598	ENSODEP00000019142	annotation not available	Tyrosine aminotransferase.	0.839
ENSODEP00000003492	ENSODEP00000000618	ENSODEP00000003492	ENSODEP00000000618	annotation not available	annotation not available	0.973
ENSODEP00000003492	MAT1A	ENSODEP00000003492	ENSODEP00000015202	annotation not available	Methionine adenosyltransferase 1A.	0.975
ENSODEP00000003492	MTHFR	ENSODEP00000003492	ENSODEP00000018192	annotation not available	Methylenetetrahydrofolate reductase.	0.417
ENSODEP00000003492	TAT	ENSODEP00000003492	ENSODEP00000019142	annotation not available	Tyrosine aminotransferase.	0.839
ENSODEP00000003615	ENSODEP00000000618	ENSODEP00000003615	ENSODEP00000000618	annotation not available	annotation not available	0.973
ENSODEP00000003615	MAT1A	ENSODEP00000003615	ENSODEP00000015202	annotation not available	Methionine adenosyltransferase 1A.	0.975