STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF219Zinc finger protein 219. (719 aa)    
Predicted Functional Partners:
CHD5
Chromodomain helicase DNA binding protein 5.
    
 0.938
CHD3
Chromodomain helicase DNA binding protein 3.
    
 0.933
ZNF521
Zinc finger protein 521.
    
 
 0.922
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
    
 
 0.914
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.907
ZNF423
Zinc finger protein 423.
    
 
0.898
Chd4
Chromodomain helicase DNA binding protein 4.
    
 0.890
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.886
MTA1
Metastasis associated 1.
    
  0.866
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.846
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.