STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000000909annotation not available (139 aa)    
Predicted Functional Partners:
MRPS9
Mitochondrial ribosomal protein S9.
  
 0.999
ENSODEP00000018854
annotation not available
   
 0.999
ENSODEP00000021380
annotation not available
   
 0.999
Fau
annotation not available
   
 0.999
ENSODEP00000009779
annotation not available
   
 0.998
PDCD11
Programmed cell death 11.
  
 0.998
ENSODEP00000001136
annotation not available
  
 0.997
ENSODEP00000025543
annotation not available
  
 0.997
RPS12
Ribosomal protein S12.
  
 0.996
ENSODEP00000009303
annotation not available
  
 0.996
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.