STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANXA5Annexin A5. (319 aa)    
Predicted Functional Partners:
ENSODEP00000020749
annotation not available
  
0.908
ENSODEP00000023952
annotation not available
  
0.906
Tonsl
Tonsoku like, DNA repair protein.
    
 0.821
CDK9
Cyclin dependent kinase 9.
   
 0.817
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.799
CDC73
Cell division cycle 73.
    
  0.754
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
     
 0.750
ENSODEP00000001405
annotation not available
   
 0.749
ENSODEP00000012974
annotation not available
   
 0.749
ENSODEP00000022098
annotation not available
   
 0.749
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.