STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA6Ubiquitin like modifier activating enzyme 6. (1065 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.996
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
  
 0.985
ENSODEP00000026177
annotation not available
   
 0.984
ENSODEP00000026556
annotation not available
   
 0.984
UBE2R2
Ubiquitin conjugating enzyme E2 R2.
   
 0.982
UBE2G1
Ubiquitin conjugating enzyme E2 G1.
   
 0.980
CDC34
Cell division cycle 34.
   
 0.978
ENSODEP00000019005
annotation not available
    
 0.977
Ube2k
annotation not available
   
 0.975
ENSODEP00000018670
annotation not available
   
 0.975
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.