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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIC1Cysteine rich hydrophobic domain 1. (222 aa)    
Predicted Functional Partners:
DHRS9
Dehydrogenase/reductase 9.
    
   0.568
WASF3
WASP family member 3.
      
 0.545
SLC7A3
Solute carrier family 7 member 3.
      
 0.534
ENSODEP00000000886
annotation not available
      
 0.533
DLG3
Discs large MAGUK scaffold protein 3.
      
 0.533
SLC16A2
Solute carrier family 16 member 2.
      
 0.479
ENSODEP00000012133
annotation not available
      
 0.457
RLIM
Ring finger protein, LIM domain interacting.
      
 0.408
PAFAH2
Platelet activating factor acetylhydrolase 2.
      
 0.406
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.