STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101569736annotation not available (150 aa)    
Predicted Functional Partners:
CCNJ
Cyclin J.
    
 0.817
ENSODEP00000025351
annotation not available
    
 0.783
NME8
NME/NM23 family member 8.
    
 0.692
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
    
 
 0.677
GART
annotation not available
     
  0.675
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.671
HSPB6
Heat shock protein family B (small) member 6.
    
 
 0.670
TRIM28
Tripartite motif containing 28.
    
 0.650
KCNQ5
Potassium voltage-gated channel subfamily Q member 5.
    
 
 0.635
GRAMD4
GRAM domain containing 4.
    
 0.629
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.