STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001011annotation not available (83 aa)    
Predicted Functional Partners:
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.998
TIMM13
Translocase of inner mitochondrial membrane 13.
   
 0.998
ENSODEP00000013617
annotation not available
   
 0.979
ENSODEP00000020238
annotation not available
   
 0.964
LOC101577103
annotation not available
   
 0.964
ENSODEP00000026755
annotation not available
   
 0.964
ENSODEP00000025643
annotation not available
  
  
0.840
NDUFS5
NADH:ubiquinone oxidoreductase subunit S5.
   
  
 0.834
ENSODEP00000009540
annotation not available
   
 
 0.811
ENSODEP00000016438
annotation not available
   
 
 0.811
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.