STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCN4Cellular communication network factor 4. (367 aa)    
Predicted Functional Partners:
CCN2
Cellular communication network factor 2.
     
  0.773
ZWINT
ZW10 interacting kinetochore protein.
    
   0.643
NDRG1
N-myc downstream regulated 1.
   
  
 0.608
WNT1
Wnt family member 1.
      
 0.607
Tm4sf19
annotation not available
      
 0.588
RHOU
Ras homolog family member U.
    
 
 0.584
WNT10B
Wnt family member 10B.
      
 0.582
WNT2
Wnt family member 2.
   
  
 0.562
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
     
  0.550
ENSODEP00000011272
annotation not available
     
  0.550
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.