STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001015annotation not available (231 aa)    
Predicted Functional Partners:
PAXIP1
PAX interacting protein 1.
    
 0.988
KDM6A
Lysine demethylase 6A.
    
 0.978
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.963
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.963
NCOA6
Nuclear receptor coactivator 6.
    
 0.961
ENSODEP00000013751
annotation not available
    
 0.947
ENSODEP00000005374
annotation not available
    
 0.926
ENSODEP00000005395
annotation not available
    
 0.926
ENSODEP00000021195
annotation not available
    
 0.916
WDR5B
WD repeat domain 5B.
    
 0.916
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.