STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001025annotation not available (125 aa)    
Predicted Functional Partners:
CSNK2A2
Casein kinase 2 alpha 2.
    
   0.846
ENSODEP00000024623
annotation not available
   
   0.823
ENSODEP00000015423
annotation not available
    
   0.747
ENSODEP00000015548
annotation not available
    
   0.747
SREK1IP1
Protein SREK1IP1-like.
    
   0.745
PPIG
Peptidylprolyl isomerase G.
    
   0.722
ZNF317
Zinc finger protein 317.
    
   0.718
ENSODEP00000009944
annotation not available
   
   0.716
RP9
RP9 pre-mRNA splicing factor.
   
   0.716
ENSODEP00000000197
annotation not available
    
   0.715
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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