Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYBBCytochrome b-245 beta chain. (570 aa)    
Predicted Functional Partners:
CYBA
Cytochrome b-245 alpha chain.
   
 0.999
NCF4
Neutrophil cytosolic factor 4.
   
 0.999
NCF1
Neutrophil cytosolic factor 1.
   
 0.999
NCF2
Neutrophil cytosolic factor 2.
   
 0.996
NOX4
NADPH oxidase 4.
  
 
0.994
NOX1
NADPH oxidase 1.
  
  
0.991
RAC2
Rac family small GTPase 2.
   
 0.988
NOXA1
NADPH oxidase activator 1.
   
 0.988
MMP9
Matrix metallopeptidase 9.
   
 
 0.981
MAPK14
Mitogen-activated protein kinase 14.
    
 0.979
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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