STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001036annotation not available (197 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
   0.983
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.972
ENSODEP00000002853
annotation not available
   
 0.959
ENSODEP00000007574
annotation not available
   
 0.959
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.959
ENSODEP00000022262
annotation not available
   
 0.959
ENSODEP00000025484
annotation not available
   
 0.959
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.956
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
 0.941
ENSODEP00000001929
annotation not available
   
 0.940
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.