STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A6Solute carrier family 17 member 6. (583 aa)    
Predicted Functional Partners:
SLC17A7
Solute carrier family 17 member 7.
   
  0.995
SLC32A1
Solute carrier family 32 member 1.
   
 
 0.993
SLC17A8
Solute carrier family 17 member 8.
   
 
  0.988
SLC18A3
Solute carrier family 18 member A3.
     
 0.982
SLC18A1
Solute carrier family 18 member A1.
     
 0.980
SLC18A2
Solute carrier family 18 member A2.
     
 0.980
SYT2
Synaptotagmin 2.
   
 
 0.918
SLC1A2
Solute carrier family 1 member 2.
   
 
 0.850
SNAP25
Synaptosome associated protein 25.
   
 0.845
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 
 0.838
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.