STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001043annotation not available (159 aa)    
Predicted Functional Partners:
SDHC
Succinate dehydrogenase complex subunit C.
   
 0.999
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
   
 0.999
ENSODEP00000025035
annotation not available
   
 0.999
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.967
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.967
CYC1
Cytochrome c1.
   
 0.961
ENSODEP00000010523
annotation not available
   
 0.953
ENSODEP00000015894
annotation not available
   
 0.953
ENSODEP00000004526
annotation not available
   
 0.947
ENSODEP00000005793
annotation not available
   
 0.947
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.