STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAC1Tachykinin precursor 1. (115 aa)    
Predicted Functional Partners:
TACR1
Tachykinin receptor 1.
    
 0.998
TACR2
Tachykinin receptor 2.
    
 0.996
TACR3
Tachykinin receptor 3.
    
 0.985
ENSODEP00000023386
annotation not available
     
 0.952
VIP
Vasoactive intestinal peptide.
   
  
 0.943
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
    
 
 0.918
ENSODEP00000025035
annotation not available
    
 
 0.907
SDHAF4
Succinate dehydrogenase complex assembly factor 4.
   
 
 0.906
NTS
Neurotensin.
   
 
 0.842
AGT
Angiotensinogen.
     
 0.834
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.