STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001048annotation not available (288 aa)    
Predicted Functional Partners:
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.961
GLYCTK
Glycerate kinase.
 
 
 0.951
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
  
 0.949
NPL
N-acetylneuraminate pyruvate lyase.
  
 0.944
HAO2
Hydroxyacid oxidase 2.
  
 
 0.941
HAO1
Hydroxyacid oxidase 1.
  
 
 0.941
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.932
AGXT2
Alanine--glyoxylate aminotransferase 2.
  
 
 0.928
GLO1
Glyoxalase I.
  
 0.928
ENSODEP00000018138
annotation not available
  
 
 0.925
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.