STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001064annotation not available (153 aa)    
Predicted Functional Partners:
DNM1L
Dynamin 1 like.
    
 0.965
TBC1D15
TBC1 domain family member 15.
    
 0.946
TBC1D17
TBC1 domain family member 17.
    
 0.934
DNM1
Dynamin 1.
    
 0.927
CLDN12
Claudin 12.
     
 0.922
DNM2
Dynamin 2.
    
 0.914
CLDN16
Claudin 16.
   
 0.896
TJP1
Tight junction protein 1.
   
 0.894
DNM3
Dynamin 3.
    
 0.890
TJP3
Tight junction protein 3.
   
 0.881
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.