Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PYURFPIGY upstream reading frame. (75 aa)    
Predicted Functional Partners:
ENSODEP00000006829
annotation not available
   
  
 0.926
ENSODEP00000014246
annotation not available
   
  
 0.926
ENSODEP00000025371
annotation not available
   
  
 0.926
LOC101563976
annotation not available
   
  
 0.926
ENSODEP00000019155
annotation not available
     
 0.896
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
    
 0.894
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
     
 0.892
PIGP
Phosphatidylinositol glycan anchor biosynthesis class P.
     
 0.892
PIGQ
Phosphatidylinositol glycan anchor biosynthesis class Q.
     
 0.892
PIGC
Phosphatidylinositol glycan anchor biosynthesis class C.
     
 0.887
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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