STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD1Thrombospondin type 1 domain containing 1. (851 aa)    
Predicted Functional Partners:
SPON1
Spondin 1.
     
 0.648
B3GLCT
Beta 3-glucosyltransferase.
    
  0.644
POFUT2
Protein O-fucosyltransferase 2.
     
 0.642
ENSODEP00000018307
annotation not available
     
 0.638
THSD4
Thrombospondin type 1 domain containing 4.
     
 0.638
SPON2
Spondin 2.
     
 0.620
CELSR2
Cadherin EGF LAG seven-pass G-type receptor 2.
   
 
 0.500
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1.
   
 
 0.500
CELSR3
Cadherin EGF LAG seven-pass G-type receptor 3.
   
 
 0.500
DLGAP3
DLG associated protein 3.
  
     0.496
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.