STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD1Thrombospondin type 1 domain containing 1. (851 aa)    
Predicted Functional Partners:
ADAMTS10
ADAM metallopeptidase with thrombospondin type 1 motif 10.
     
 0.767
ADAMTS6
ADAM metallopeptidase with thrombospondin type 1 motif 6.
     
 0.767
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
     
 0.764
ADAMTS16
ADAM metallopeptidase with thrombospondin type 1 motif 16.
     
 0.764
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
     
 0.733
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
     
 0.733
ADAMTS19
ADAM metallopeptidase with thrombospondin type 1 motif 19.
     
 0.653
ADAMTS17
ADAM metallopeptidase with thrombospondin type 1 motif 17.
     
 0.653
THBS1
Thrombospondin 1.
    
 0.617
SPON1
Spondin 1.
     
 0.610
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.