Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDRG1N-myc downstream regulated 1. (394 aa)    
Predicted Functional Partners:
NDRG2
NDRG family member 2.
    
   0.950
ENSODEP00000006140
annotation not available
   
 
 0.906
ATP1A1
ATPase Na+/K+ transporting subunit alpha 1.
    
 
 0.865
ATP1A2
ATPase Na+/K+ transporting subunit alpha 2.
    
 
 0.865
ENSODEP00000007187
annotation not available
    
 
 0.857
TP53
Tumor protein p53.
    
 0.852
CDH1
Cadherin-1-like.
    
 
 0.850
NDRG4
NDRG family member 4.
    
   0.849
MYCN
MYCN proto-oncogene, bHLH transcription factor.
    
 
 0.809
ENSODEP00000003618
annotation not available
    
 
 0.775
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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