DLG3 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

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Textmining

[Homology]

Score

DLG3

Discs large MAGUK scaffold protein 3. (850 aa)

Predicted Functional Partners:

GRIN2B

0.997

DLG4

0.997

GRIN2A

0.996

LLGL1

0.993

LLGL2

0.991

GRIN1

0.991

DLG2

0.986

DLG1

0.986

NEDD4

0.976

NEDD4L

0.976

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLG1	DLG3	ENSODEP00000017205	ENSODEP00000001079	Discs large MAGUK scaffold protein 1.	Discs large MAGUK scaffold protein 3.	0.986
DLG1	DLG4	ENSODEP00000017205	ENSODEP00000023551	Discs large MAGUK scaffold protein 1.	Discs large MAGUK scaffold protein 4.	0.992
DLG1	GRIN1	ENSODEP00000017205	ENSODEP00000021921	Discs large MAGUK scaffold protein 1.	Glutamate ionotropic receptor NMDA type subunit 1.	0.979
DLG1	GRIN2A	ENSODEP00000017205	ENSODEP00000015210	Discs large MAGUK scaffold protein 1.	Glutamate ionotropic receptor NMDA type subunit 2A.	0.980
DLG1	GRIN2B	ENSODEP00000017205	ENSODEP00000014052	Discs large MAGUK scaffold protein 1.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.986
DLG1	LLGL1	ENSODEP00000017205	ENSODEP00000008288	Discs large MAGUK scaffold protein 1.	LLGL scribble cell polarity complex component 1.	0.970
DLG1	LLGL2	ENSODEP00000017205	ENSODEP00000013377	Discs large MAGUK scaffold protein 1.	LLGL scribble cell polarity complex component 2.	0.969
DLG1	NEDD4	ENSODEP00000017205	ENSODEP00000009108	Discs large MAGUK scaffold protein 1.	NEDD4 E3 ubiquitin protein ligase.	0.853
DLG1	NEDD4L	ENSODEP00000017205	ENSODEP00000025266	Discs large MAGUK scaffold protein 1.	NEDD4 like E3 ubiquitin protein ligase.	0.887
DLG2	DLG3	ENSODEP00000005517	ENSODEP00000001079	Discs large MAGUK scaffold protein 2.	Discs large MAGUK scaffold protein 3.	0.986
DLG2	DLG4	ENSODEP00000005517	ENSODEP00000023551	Discs large MAGUK scaffold protein 2.	Discs large MAGUK scaffold protein 4.	0.992
DLG2	GRIN1	ENSODEP00000005517	ENSODEP00000021921	Discs large MAGUK scaffold protein 2.	Glutamate ionotropic receptor NMDA type subunit 1.	0.979
DLG2	GRIN2A	ENSODEP00000005517	ENSODEP00000015210	Discs large MAGUK scaffold protein 2.	Glutamate ionotropic receptor NMDA type subunit 2A.	0.980
DLG2	GRIN2B	ENSODEP00000005517	ENSODEP00000014052	Discs large MAGUK scaffold protein 2.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.986
DLG2	LLGL1	ENSODEP00000005517	ENSODEP00000008288	Discs large MAGUK scaffold protein 2.	LLGL scribble cell polarity complex component 1.	0.970
DLG2	LLGL2	ENSODEP00000005517	ENSODEP00000013377	Discs large MAGUK scaffold protein 2.	LLGL scribble cell polarity complex component 2.	0.969
DLG2	NEDD4	ENSODEP00000005517	ENSODEP00000009108	Discs large MAGUK scaffold protein 2.	NEDD4 E3 ubiquitin protein ligase.	0.853
DLG2	NEDD4L	ENSODEP00000005517	ENSODEP00000025266	Discs large MAGUK scaffold protein 2.	NEDD4 like E3 ubiquitin protein ligase.	0.887
DLG3	DLG1	ENSODEP00000001079	ENSODEP00000017205	Discs large MAGUK scaffold protein 3.	Discs large MAGUK scaffold protein 1.	0.986
DLG3	DLG2	ENSODEP00000001079	ENSODEP00000005517	Discs large MAGUK scaffold protein 3.	Discs large MAGUK scaffold protein 2.	0.986