STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001081annotation not available (887 aa)    
Predicted Functional Partners:
DXO
Decapping exoribonuclease.
   
 0.996
ENSODEP00000011860
annotation not available
  
 
0.987
NOL9
Nucleolar protein 9.
   
 0.980
LAS1L
LAS1 like ribosome biogenesis factor.
    
 0.953
CREBZF
CREB/ATF bZIP transcription factor.
    
 0.953
EXOSC10
Exosome component 10.
   
 0.953
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
    
 
 0.949
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
 
 0.949
EXOSC5
Exosome component 5.
   
 
 0.931
EXOSC9
Exosome component 9.
     
 0.931
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.