Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FGF16Fibroblast growth factor 16. (207 aa)    
Predicted Functional Partners:
FGFR1
Fibroblast growth factor receptor 1.
    
 0.991
ENSODEP00000017080
annotation not available
    
 0.987
FGFR2
Fibroblast growth factor receptor 2.
    
 0.982
FGFR4
Fibroblast growth factor receptor 4.
    
 0.978
RET
Ret proto-oncogene.
    
 0.966
KDR
Kinase insert domain receptor.
    
 0.937
PDGFRA
Platelet derived growth factor receptor alpha.
   
 0.931
PDGFRB
Platelet derived growth factor receptor beta.
    
 0.928
TEK
TEK receptor tyrosine kinase.
    
 0.925
KIT
KIT proto-oncogene, receptor tyrosine kinase.
    
 0.925
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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